Cellular and Molecular Biology and Immunology

  •  

Cellular and Molecular Biology and Immunology

  • Chromosomes

    • 46 chromosomes in 23 pairs: 22 pairs of autosomes, 1 pair of sex chromosomes

    • Composed of DNA coiled around histone proteins

      • DNA has a double-helix structure with linked nucleotides (adenine linked to thymine; guanine linked to cytosine) on a sugar-phosphate backbone

      • Three nucleotides = 1 codon, which corresponds to one amino acid

         

         

         

        FIG. 1.47 DNA information is transcribed into RNA in the nucleus. Messenger RNA is then transported to the cytoplasm, where ribosomes complete translation into proteins.

        From Jorde LB et al, editors: Medical genetics, ed 2, St Louis, 1999, Mosby.

      • String of codons code for a string of amino acids = protein

      • Gene: a section of DNA that codes for one protein

Transcription—DNA to mRNA ( Fig. 1.47 )

  • Unwinding of DNA for transcription occurs by DNA topoisomerase.

    • Topoisomerase-1 (scl-70) antibodies are seen in scleroderma and CREST (calcinosis, Raynaud phenomenon, sclerodactyly, telangiectasia) syndrome.

  • RNA polymerase “reads” unwound DNA and builds corresponding mRNA

    • RNA: single-stranded ribose sugar composed of nucleotides adenine, guanine, cytosine, and uracil

    • Uracil in RNA links to adenine of DNA because there is no thymine in RNA

  • Posttranscription modification

    • Exons are regions of DNA that code for mRNA (mnemonic: EXons are EXpressed).

    • Introns are regions of DNA that are between exons; 97% of the human genome consists of noncoding DNA.

    • Splicing is the processing and removal of introns along with the combining of exons to make final mRNA used in translation.

      • Small nuclear ribonucleoproteins (snRNPs) are RNA-protein complexes that mediate this posttranscriptional modification.

      • Examples of these proteins are the U1 and Smith proteins.

        • Anti-Smith antibodies are specific to SLE.

        • Anti–U1-RNP antibodies are seen in mixed connective tissue disease.

  • Translation (see Fig. 1.47)

    • Building of a protein out of amino acids from mRNA template

      • Transfer RNA carries a specific amino acid to the ribosome, based on the mRNA codon.

        • Antibodies to tRNA synthetase (anti–Jo-1 antibodies) are seen in

          dermatomyositis.

  • Cell cycle and ploidy

     

  • Genetics

  • Ploidy is the number of sets of chromosomes in a cell annotated by XN.

  • The cell cycle entails the events within a cell that result in DNA duplication, with production of two daughter cells.

    • Growth 0 (G0)—stable phase of cells with diploid (2N) DNA content

    • Growth 1 (G1)—upon stimulus, cells begin growth but remain diploid (2N).

    • Synthesis (S)—period of DNA replication resulting in tetraploidy (4N)

    • Growth 2 (G2)—phase of cell growth and protein synthesis that is tetraploid (4N) throughout

    • Mitosis (M)—sequence of events that result in two identical daughter cells that are each 2N

      • Separation of chromosomal material for daughter cells occurs by spindle fibers’ attachment to centromeres that link sister chromatids

        • Anticentromere antibodies are seen in CREST syndrome.

  • Certain proteins regulate progression through the cell cycle. Genetic defects and alterations of these tumor suppressor proteins can predispose a cell to dysregulated growth.

    • pRb-1 (retinoblastoma protein) undergoes progressive cell cycle–regulated phosphorylation.

      • Targets E2F, a transcription factor that regulates genes important for cell cycle control.

      • Implicated in retinoblastoma and osteosarcoma

    • p53—prevents entry to S phase

      • Implicated in osteosarcoma, rhabdomyosarcoma, and chondrosarcoma

  • Mendelian inheritance

    • Due to transmission of alleles to offspring

      • Phenotype refers to the features (traits) exhibited because of genetic makeup (genotype).

  • Mendelian traits may be inherited by one of four modes (Tables 1.30

    and 1.31).

    • Autosomal dominant (AD)

      • Involves a gene on an autosomal chromosome; one of the two alleles for the chromosome pair must be abnormal for the disease phenotype to occur.

      • Examples: syndactyly/polydactyly, Marfan syndrome, hereditary multiple exostoses (HME), malignant hyperthermia, Ehlers-Danlos syndrome, achondroplasia, osteogenesis imperfecta (types I and IV)

    • Autosomal recessive (AR) (most enzyme/biochemical deficiencies)

      • Involves a gene on an autosomal chromosome; both alleles for the chromosome pair must be abnormal for the disease phenotype to occur.

        • Example: diastrophic dysplasia, due to a mutation in the DTDST (SLC26A2) gene on chromosome 5 that encodes for a sulfate transport protein

    • X-linked dominant

 

 

Table 1.30

 

Mendelian Inheritance

 

 

Inheritance Pattern

Description

Punnett Square(s)

Autosomal

Autosomal dominant disorders typically represent structural defects.

Disorder is manifested in the heterozygous state (Aa).

Affects 50% of offspring (assuming only one parent is affected)

Normal offspring do not transmit the condition.

There is no gender preference.

 

 

 

dominant•

A is the

mutant

dominant

allele.

Autosomal recessive•

Autosomal recessive disorders typically represent biochemical or

 

 

 

a is the

enzymatic defects.

mutant

recessive allele.

Disorder is manifested in the

homozygous state (aa).

Parents are unaffected (they are most commonly heterozygotes).

 

Affects 25% of offspring (assuming each parent is a heterozygote).

There is no gender preference.

 

X-linked

dominant• X′ is the mutant dominant X allele.

X-linked dominant disorders are manifested in the heterozygous state (X′X or X′Y).

Affected female (mating with unaffected male) transmits the X-linked gene to 50% of daughters and 50% of sons.

Affected male (mating with unaffected female) transmits the X-linked gene to all daughters and no sons.

 

 

 

X-linked

recessive• X is the mutant recessive X allele.

Heterozygote (X′Y) male manifests the condition.

Heterozygote (X′X) female is unaffected.

Affected male (mating with unaffected female) transmits the X-linked gene to all daughters (who are carriers) and no sons.

Carrier female (mating with unaffected male) transmits the X-linked gene to 50% of daughters (who are carriers) and 50% of sons (who are affected).

 

 

 

 

 

 

Table 1.31

 

Comprehensive Compilation of Inheritance Pattern, Defect, and Associated Gene in Musculoskeletal Disorders

 

 

Disorder Inheritance Pattern Defect Associated Gene

Dysplasias

Achondroplasia

Autosomal dominant

Defect in the fibroblast growth factor receptor 3

FGF3R

Diastrophic dysplasia

Autosomal recessive

Mutation of a gene coding for a sulfate transport protein

DTDST

Kniest dysplasia

Autosomal dominant

Defect in type II collagen

COL 2A1

Laron dysplasia (pituitary dwarfism)

Autosomal recessive

Defect in the growth hormone

 

 

 

receptor

 

McCune-Albright syndrome (polyostotic fibrous dysplasia, café-au-lait spots, precocious puberty)

Sporadic mutation

Germline defect in the Gsα protein

Mutation of Gsα subunit of th receptor/aden cyclase–coup G proteins

Metaphyseal chondrodysplasia:

 

 

 

Jansen form

Autosomal dominant

 

PTH; PTH-related protein

McKusick form

Autosomal recessive

 

RMRP

Schmid-tarda form

Autosomal dominant

Defect in type X collagen

COL 10A1

Multiple epiphyseal dysplasia

Autosomal dominant (most commonly)

Cartilage

oligomeric matrix protein

COMP

Spondyloepiphyseal dysplasia

Autosomal

dominant (congenita form)

X-linked recessive (tarda form)

Defect in type II collagen

Linked to Xp22.1 p22.31, SEDL

(tarda), and C 2A1 (congenit

Achondrogenesis

Autosomal recessive

Fetal cartilage fails to mature

 

Apert syndrome

Sporadic

mutation/autosomal dominant

 

FGF2R

Chondrodysplasia punctata

 

 

 

Conradi-Hünerman

Autosomal dominant

 

 

Rhizomelic form

Autosomal recessive

Defect in

subcellular organelles (peroxisomes)

 

Cleidocranial dysplasia (dysostosis)

Autosomal dominant

Mutation of a gene coding for a protein related to

CBFA1

 

 

osteoblast function

 

Dysplasia epiphysealis hemimelica (Trevor disease)

Unknown

 

 

Ellis–van Creveld syndrome (chondroectodermal dysplasia)

Autosomal recessive

 

EVC

Table Conti

 

Disorder Inheritance Pattern Defect Associa

Fibrodysplasia ossificans progressiva

Sporadic

mutation/autosomal dominant

 

 

Geroderma osteodysplastica (Walt Disney dwarfism)

Autosomal recessive

 

 

Grebe chondrodysplasia

Autosomal recessive

 

 

Hypochondroplasia

Sporadic

mutation/autosomal dominant

 

FGF3R

Kabuki makeup syndrome

Sporadic mutation

 

 

Mesomelic dysplasia (Langer type)

Autosomal recessive

 

 

Mesomelic dysplasia

 

 

 

Nievergelt type

Autosomal dominant

 

 

Reinhardt-Pfeiffer type

Autosomal dominant

 

 

Werner type

Autosomal dominant

 

 

Metatrophic dysplasia

Autosomal recessive

 

 

Progressive diaphyseal dysplasia (Camurati-Engelmann disease)

Autosomal dominant

 

 

Pseudoachondroplastic dysplasia

Autosomal dominant

 

COMP

Pyknodysostosis

Autosomal recessive

 

 

Spondylometaphyseal chondrodysplasia

Autosomal dominant

 

 

 

 

 

 

Spondylothoracic dysplasia (Jarcho-Levin syndrome)

Autosomal recessive

 

 

Thanatophoric dwarfism

Autosomal dominant

 

FGF3R

Tooth-and-nail syndrome

Autosomal dominant

 

 

Treacher Collins syndrome (mandibulofacial dysostosis)

Autosomal dominant

 

 

Metabolic Bone Diseases

Hereditary vitamin D–dependent rickets

Autosomal recessive

See Table 1.16

 

Hypophosphatasia

Autosomal recessive

See Table 1.16

PHEX

Hypophosphatemic rickets (vitamin D–resistant rickets)

X-linked dominant

See Table 1.16

PHEX

Osteogenesis imperfecta

Autosomal

dominant (types I and IV)

Autosomal

recessive (types II and III)

Defect in type I collagen (abnormal cross-linking)

COL IA

IA2

Albright hereditary osteodystrophy (pseudohypoparathyroidism)

Uncertain

PTH has no effect at the target cells (in the kidney, bone, and intestine)

 

Infantile cortical hyperostosis (Caffey disease)

Unknown

 

 

Ochronosis (alkaptonuria)

Autosomal recessive

Defect in the homogentisic acid oxidase system

 

Osteopetrosis

Autosomal

dominant (mild, tarda form)

Autosomal

recessive (infantile, malignant form)

 

CLCN7,

Connective Tissue Disorders

Marfan syndrome

Autosomal dominant

Fibrillin

abnormalities (some patients also have type I

FBN1 o

βR2

 

 

collagen abnormalities)

 

Ehlers-Danlos syndrome (there are at least 13 varieties)

Autosomal dominant (most common)

Defects in types I and III collagen have been described for some varieties; lysyl oxidase abnormalities

COL

( I

c

COL

(

Homocystinuria

Autosomal recessive

Deficiency of the enzyme cystathionine β-synthase

 

Mucopolysaccharidosis

Hunter syndrome (gargoylism)

X-linked recessive

 

 

Hurler syndrome

Autosomal recessive

Deficiency of the enzyme α-L-iduronidase

 

Maroteaux-Lamy syndrome

Autosomal recessive

 

 

Morquio syndrome

Autosomal recessive

 

 

Sanfilippo syndrome

Autosomal recessive

 

 

Scheie syndrome

Autosomal recessive

Deficiency of the enzyme α-L-iduronidase

 

Muscular Dystrophies

Duchenne muscular dystrophy

X-linked recessive

Defect on the short arm of the X chromosome

Dystrop

Becker dystrophy

X-linked recessive

 

 

Fascioscapulohumeral dystrophy

Autosomal dominant

 

 

Limb-girdle dystrophy

Autosomal recessive

 

 

Steinert disease (myotonic dystrophy)

Autosomal dominant

 

 

Table C

 

Disorder

Inheritance

Defect

Associated Gene

 

Pattern

Hematologic Disorders

Hemophilia (A and B)

X-linked

recessive

Hemophilia A: factor VIII deficiency

Hemophilia B: factor IX deficiency

 

Sickle cell anemia

Autosomal

recessive

Hemoglobin abnormality (presence of hemoglobin S)

 

Gaucher disease

Autosomal

recessive

Deficient activity of the enzyme β-glucosidase (glucocerebrosidase)

 

Hemochromatosis

Autosomal

recessive

 

 

Niemann-Pick disease

Autosomal

recessive

Accumulation of sphingomyelin in cellular lysosomes

 

Smith-Lemli-Opitz syndrome

Uncertain

 

 

Thalassemia

Autosomal

recessive

Abnormal production of hemoglobin A

 

von Willebrand disease

Autosomal

dominant

 

 

Chromosomal Disorders With Musculoskeletal Abnormalities

Down syndrome

 

Trisomy of

chromosome 21

 

Angelman syndrome

 

Chromosome 15 abnormality

 

Clinodactyly

 

Associated with many genetic anomalies, including trisomy of chromosomes 8 and

21

 

Edward syndrome

 

Trisomy of

chromosome 18

 

Fragile X syndrome

X-linked trait (does not follow the typical

 

Xq27-28

 

pattern of an X-linked trait)

 

 

Klinefelter syndrome (XXY)

 

An extra X

chromosome in affected boys and men

 

Langer-Giedion syndrome

Sporadic

mutation

Chromosome 8 abnormality

 

Nail-patella syndrome

Autosomal

dominant

 

LMX1B

Patau syndrome

 

Trisomy of

chromosome 13

 

Turner syndrome (XO)

 

One of the two X chromosomes missing in affected girls and women

SHOX

Neurologic Disorders

Charcot-Marie-Tooth disease

Autosomal

dominant (most common)

Chromosome 17 defect for encoding peripheral myelin protein-22

PMP22

Congenital insensitivity to pain

Autosomal

recessive

 

 

Dejerine-Sottas disease

Autosomal

recessive

 

 

Friedreich ataxia

Autosomal

recessive

 

 

Huntington disease

Autosomal

dominant

 

 

Menkes syndrome

X-linked

recessive

Inability to absorb and use copper

 

Pelizaeus-Merzbacher disease

X-linked

recessive

Defect in the gene for proteolipid (a component of myelin)

 

Riley-Day syndrome

Autosomal

recessive

 

 

Spinal muscular atrophy (Werdnig-Hoffman disease and Kugelberg-

Autosomal

recessive

 

 

Welander disease)

 

 

 

Sturge-Weber syndrome

Sporadic

mutation

 

 

Tay-Sachs disease

Autosomal

recessive

Deficiency in the enzyme hexosaminidase A

 

Diseases Associated with Neoplasias

Ewing sarcoma

 

 

11;22

chromosomal translocation (EWS/FL11

fusion gene)

Multiple endocrine neoplasia (MEN):

 

 

 

Type I

Autosomal

dominant

 

RET

Type II

Autosomal

dominant

 

 

Type III

Autosomal

dominant

Chromosome 10 abnormality

 

Neurofibromatosis (von Recklinghausen disease) type 1 (NF1) and type 2 (NF2)

Autosomal

dominant

NF1: chromosome 17 defect; codes for neurofibromin

NF2: chromosome 22 defect

NF1, NF2

Synovial sarcoma

 

 

(X;18) (p11;q11)

chromosomal translocations (STT/SSX

fusion gene)

Miscellaneous Disorders

Malignant hyperthermia

Autosomal

dominant

 

 

Osteochondromatosis

Autosomal

dominant

 

 

Postaxial polydactyly

Autosomal

dominant

 

GLI3 (types

A, A/B)

 

 

 

GJA1 (type IV)

Camptodactyly

Autosomal

dominant

 

 

Table Continued

 

Disorder Inheritance Pattern Defect Associa

Cerebrooculofacioskeletal syndrome

Autosomal recessive

 

 

Congenital contractural arachnodactyly

 

 

Fibrillin

(chr 5)

Distal arthrogryposis syndrome

Autosomal dominant

 

 

Dupuytren contracture

Autosomal dominant (with partial sex limitation)

 

 

Fabry disease

X-linked recessive

Deficiency of α-galactosidase A

 

Fanconi pancytopenia

Autosomal recessive

 

 

Freeman-Sheldon syndrome (craniocarpotarsal dysplasia; whistling face syndrome)

Autosomal

dominant Autosomal

recessive

 

 

GM1 gangliosidosis

Autosomal recessive

 

 

Hereditary anonychia

Autosomal dominant

 

 

Holt-Oram syndrome

Autosomal dominant

 

 

Humeroradial synostosis

Autosomal dominant

 

 

Autosomal recessive

 

 

Klippel-Feil syndrome

 

Faulty development of spinal segments along the embryonic neural tube

 

Klippel-Trénaunay-Weber syndrome

Sporadic mutation

 

 

Krabbe disease

Autosomal recessive

Deficiency of galactocerebroside β-galactosidase

 

Larsen syndrome

Autosomal

dominant Autosomal

recessive

 

 

Lesch-Nyhan disease

X-linked trait

Absence of the enzyme hypoxanthine guanine phosphoribosyl transferase

 

Madelung deformity

Autosomal dominant

 

 

Mannosidosis

Autosomal recessive

Deficiency of the enzyme α-mannosidase

 

Maple syrup urine disease

Autosomal recessive

Defective metabolism of the amino acids leucine, isoleucine, and valine

 

Meckel syndrome (Gruber syndrome)

Autosomal recessive

 

 

Möbius syndrome

Autosomal dominant

 

 

Mucolipidosis (oligosaccharidosis)

Autosomal recessive

A family of enzyme deficiency diseases

 

Multiple exostoses

Autosomal dominant

 

EXT

 

r EXT

Multiple pterygium syndrome

Autosomal recessive

 

 

Noonan syndrome

Sporadic mutation

 

 

Oral-facial-digital (OFD) syndrome

 

 

OFD

l

 

OFD

s a r

Osler-Weber-Rendu syndrome (hereditary hemorrhagic

Autosomal dominant

 

 

telangiectasia)

 

 

 

Pfeiffer syndrome (acrocephalosyndactyly)

Sporadic

mutation/autosomal dominant

 

FGF2R

Phenylketonuria

Autosomal recessive

Enzyme deficiency characterized by the inability to convert phenylalanine to tyrosine because of a chromosome 12 abnormality

 

Phytanic acid storage disease

Autosomal recessive

 

 

Progeria (Hutchinson-Gilford progeria syndrome)

Autosomal dominant

 

 

Proteus syndrome

Autosomal dominant

 

 

Prune-belly syndrome

Uncertain

Localized

mesodermal defect

 

Radioulnar synostosis

Autosomal dominant

 

 

Rett syndrome

Sporadic mutation/X-linked dominant

 

 

Roberts syndrome (pseudothalidomide syndrome)

Sporadic

mutation/autosomal recessive

 

 

Russell-Silver syndrome

Sporadic mutation (possibly X-linked)

 

 

Saethre-Chotzen syndrome

Autosomal dominant

 

 

Sandhoff disease

Autosomal recessive

Enzyme deficiency of hexosaminidases A and B

 

Schwartz-Jampel syndrome

Autosomal recessive

 

 

Seckel syndrome (so-called bird-headed dwarfism)

Autosomal recessive

 

 

Table

 

Disorder

Inheritance Pattern

Defect

Associated Gene

Stickler syndrome (hereditary progressive arthroophthalmopathy)

Autosomal

dominant

Collagen

abnormality

 

 

 

 

 

Thrombocytopenia-aplasia of radius (TAR) syndrome

Autosomal

recessive

 

 

Tarsal coalition

Autosomal

dominant

 

 

Trichorhinophalangeal syndrome

Autosomal

dominant

 

 

Argininemia

Autosomal

recessive

 

 

Argininosuccinic aciduria

Autosomal

recessive

 

 

Carbamyl phosphate synthetase

 

deficiency

Autosomal

recessive

 

 

Citrullinemia

Autosomal

recessive

 

 

Ornithine transcarbamylase

 

deficiency

X-linked

 

 

VATER association

Sporadic

mutation

 

 

Werner syndrome

Autosomal

recessive

 

 

Zygodactyly

Autosomal

dominant

 

 

TGF-βR2, TGF-β receptor 2; VATER, vertebral defects, imperforate anus, tracheoesophageal fistula, and radial and renal dysplasia.

  • Example: hypophosphatemic rickets, due to PHEX

gene mutation (Xp.22)

  • X-linked recessive

    • Examples: Duchenne and Becker muscular dystrophies, Hunter syndrome, hemophilia, spondyloepiphyseal dysplasia (SED) tarda

  • Nonmendelian traits may be inherited through “polygenic” transmission caused by the action of several genes

    • Charcot-Marie-Tooth disease (AD, AR, and X-linked forms)

    • Osteopetrosis (AD and AR)

    • Osteogenesis imperfecta (AD and AR)

    • Neurofibromatosis (AD and AR)

    • SED (AD and X-linked)

  • Mutations

    • Genetic disorders arise from alterations (mutations) in the

      genetic material.

      • Most skeletal dysplasias are single-gene mutations.

        • Collagen type I (bone) defects

          • Osteogenesis imperfecta (types I–IV)—COL1A1

            and COL1A2 genes

          • Ehlers-Danlos—COL5A1 and COL5A2 genes

        • Collagen type II (cartilage) defects

          • SED—COL2A1 geneusually random mutations

             

  • Epigenetics

    • Others

       

    • Multiple epiphyseal dysplasia—COMP (cartilage oligomeric matrix protein) gene; also associated with pseudoachondroplasia)

    • Marfan syndrome

      FBN1 (fibrillin-1) gene

    • Achondroplasia—FGFR3 (fibroblast growth factor receptor) gene

    • Spinal muscular atrophy

      SMN1 (survival motor neuron-1) gene

      • Genetic alterations that are not caused by mutations in DNA sequence

        • DNA methylation

        • Histone posttranslational modifications

        • Genomic imprinting (parent-of-origin phenotypes)

          • An example of genomic imprinting is the loss of a region in chromosome 15 with Prader-Willi syndrome (paternal; obesity, hypogonadism, hypotonia) and Angelman syndrome (maternal; epilepsy, tremors, smiling)

            • Chromosomal abnormalities

              • Disruptions in the normal arrangement or number of chromosomes

              • Trisomy: one chromosome pair has an extra chromosome (total: 47 chromosomes)

                • Trisomy 21 (Down syndrome)—ligamentous laxity, atlantoaxial instability, patellar and hip dislocations, severe flatfoot, and bunions

              • Deletion: absence of a section of one chromosome (in a chromosome pair).

              • Duplication: presence of an extra section of one chromosome (in a chromosome pair).

              • Translocation: exchange of a portion of one chromosome with a portion of another chromosome

              • Inversion: a broken portion of a chromosome reattaches to the same chromosome in the same location but in a reverse direction.

            • Genetics of musculoskeletal conditions and abnormalities are summarized in Table 1.31.

            • Techniques used to study genetic (inherited) disorders

              • Restriction enzymes

                • Used to cut DNA at precise, reproducible cleavage locations

                • Identify polymorphisms (alternative gene expressions)

              • Agarose gel electrophoresis

                • Molecules are suspended in agarose gel that is exposed to an electric field.

                • Molecules move through the gel according to size and polarity

                  • Southern blot: detects DNA

                  • Northern blot: detects RNA

                  • Western blot: detects protein

              • Plasmid vectors

                • A plasmid is a small, extrachromosomal, circular piece of DNA that replicates independently of the host DNA. Plasmids can confer antibiotic resistance between bacteria.

                • The recombinant plasmid is inserted into a bacterium (the vector) by a process called transformation. The bacterium then produces a recombinant protein encoded by the inserted gene.

              • Cytogenetic analysis

                 

                 

                 

                FIG. 1.48 Innate immunity and adaptive immunity. The mechanisms of innate immunity provide the initial defense against infections. Adaptive immune responses develop later and consist of activation of lymphocytes.

                From Abbas AK et al: Cellular and molecular immunology, ed 6, Philadelphia, 2009, Saunders.

                 

                • Gross examination of chromosomes under microscope with the use of techniques of banding and fluorescent in situ hybridization

                • Used to detect chromosomal translocations

                  • t(X;18)—in synovial sarcoma

                  • t(11;22)—in Ewing sarcoma

                  • t(2;13)—in rhabdomyosarcoma

                  • t(12;16)—in myxoid liposarcoma

                  • t(12;22)—in clear cell sarcoma

              • Transgenic animals

                • Bred to investigate the function of cloned genes.

              • PCR amplification

                • Repetitive synthesis (amplification) of a specific DNA sequence in vitro

                • Screening DNA for gene mutations (e.g., prenatal diagnosis of sickle cell)

              • Reverse transcription PCR (RT-PCR)

                • Reverse transcriptase is used to “reverse transcribe” RNA to complementary DNA.

                • Typically used to study RNA viruses

              • Silencing RNA (siRNA)

                • Blocks transcription of mRNA in order to study

            result of gene’s loss of function